STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTI12_AA492280RNA-directed DNA polymerase, eukaryota, Reverse transcriptase zinc-binding domain protein. (239 aa)    
Predicted Functional Partners:
CTI12_AA609520
Ribosomal protein L21e.
   
   0.472
CTI12_AA493690
Ribosomal protein L21e.
   
   0.472
CTI12_AA485950
Ribosomal protein L21e.
   
   0.472
CTI12_AA255750
Ribosomal protein L21e.
   
   0.472
CTI12_AA135480
Ribosomal protein L21e.
   
   0.472
CTI12_AA344850
Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
   0.443
CTI12_AA220840
Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
   0.443
CTI12_AA185430
Ribosomal protein L39e.
   
   0.429
Your Current Organism:
Artemisia annua
NCBI taxonomy Id: 35608
Other names: A. annua, Artemisia annua L., sweet Annie, sweet wormwood
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.