STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTI12_AA488210Zinc finger BED domain-containing protein RICESLEEPER 1. (335 aa)    
Predicted Functional Partners:
CTI12_AA256800
BED zinc finger, hAT family dimerization domain protein.
  
     0.534
CTI12_AA403530
Uncharacterized protein.
  
 
   0.531
CTI12_AA335690
Zinc finger, BED-type.
  
     0.531
CTI12_AA303840
BED zinc finger, hAT family dimerization domain protein.
  
     0.530
CTI12_AA461350
Zinc finger, BED-type.
  
     0.526
CTI12_AA453540
Transposase, MuDR, MULE transposase domain protein.
  
     0.522
CTI12_AA092450
Uncharacterized protein.
  
 
   0.519
CTI12_AA488490
BED zinc finger, hAT family dimerization domain protein.
  
     0.518
CTI12_AA431380
Zinc finger, BED-type.
  
     0.516
CTI12_AA216230
Zinc finger, BED-type.
  
     0.515
Your Current Organism:
Artemisia annua
NCBI taxonomy Id: 35608
Other names: A. annua, Artemisia annua L., sweet Annie, sweet wormwood
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.