STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTI12_AA447370Plasma-membrane choline transporter family protein. (73 aa)    
Predicted Functional Partners:
CTI12_AA455220
Solute:sodium symporter,urea transmembrane transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     
 0.845
CTI12_AA615830
Transcription factor bHLH95.
  
     0.517
CTI12_AA403300
FRIGIDA-like protein; Belongs to the Frigida family.
  
     0.495
CTI12_AA289260
FRIGIDA-like protein; Belongs to the Frigida family.
  
     0.495
CTI12_AA264640
Uncharacterized protein.
  
     0.494
CTI12_AA478750
FRIGIDA-like protein; Belongs to the Frigida family.
  
     0.493
CTI12_AA339260
FRIGIDA-like protein; Belongs to the Frigida family.
  
     0.493
CTI12_AA498870
FRIGIDA-like protein; Belongs to the Frigida family.
  
     0.492
CTI12_AA030170
SAND domain-containing protein.
  
     0.492
CTI12_AA472170
Uncharacterized protein.
  
     0.491
Your Current Organism:
Artemisia annua
NCBI taxonomy Id: 35608
Other names: A. annua, Artemisia annua L., sweet Annie, sweet wormwood
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