STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTI12_AA428420Protein CHROMATIN REMODELING 4. (896 aa)    
Predicted Functional Partners:
CTI12_AA140400
DDT domain-containing protein.
   
 0.897
CTI12_AA081390
Actin-related protein 5; Belongs to the actin family.
    
 0.887
CTI12_AA328600
Putative 15.9 kDa subunit of RNA polymerase II.
    
 0.857
CTI12_AA190000
Helicase, C-terminal.
   
 0.851
CTI12_AA009820
SNF2-related, N-terminal domain-containing protein.
   
0.851
CTI12_AA607090
DNA-directed RNA polymerase family protein.
   
 0.846
CTI12_AA536670
DNA-directed RNA polymerase family protein.
   
 0.846
CTI12_AA518010
RuvB-like helicase.
    
 0.829
CTI12_AA020060
RuvB-like helicase; Belongs to the RuvB family.
    
 0.829
CTI12_AA237200
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.778
Your Current Organism:
Artemisia annua
NCBI taxonomy Id: 35608
Other names: A. annua, Artemisia annua L., sweet Annie, sweet wormwood
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.