STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTI12_AA421960Ribonuclease H-like domain-containing protein. (1560 aa)    
Predicted Functional Partners:
CTI12_AA260080
Gag_pre-integrs domain-containing protein.
  
     0.521
CTI12_AA408150
Gag-Pol.
  
     0.496
CTI12_AA098420
Retrovirus-related Pol polyprotein from transposon TNT 1-94.
  
     0.492
CTI12_AA539520
Asparaginyl-tRNA synthetase 2.
    
  0.489
CTI12_AA372830
Asparaginyl-tRNA synthetase 2.
    
  0.489
CTI12_AA322480
Asparaginyl-tRNA synthetase 2.
    
  0.489
CTI12_AA106830
Retrovirus-related Pol polyprotein from transposon TNT 1-94.
  
     0.489
CTI12_AA043960
Zinc finger, CCHC-type.
  
     0.475
CTI12_AA154820
Zinc finger, CCHC-type.
  
     0.440
CTI12_AA213530
Zinc finger, CCHC-type.
  
     0.424
Your Current Organism:
Artemisia annua
NCBI taxonomy Id: 35608
Other names: A. annua, Artemisia annua L., sweet Annie, sweet wormwood
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.