STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTI12_AA398610Metal-dependent protein hydrolase. (353 aa)    
Predicted Functional Partners:
CTI12_AA488360
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
    0.683
CTI12_AA562950
Beta-grasp domain-containing protein.
   
    0.679
CTI12_AA152320
2Fe-2S ferredoxin-type domain-containing protein.
   
    0.679
CTI12_AA113240
NADH-ubiquinone oxidoreductase.
   
    0.679
CTI12_AA513640
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
   
    0.664
CTI12_AA392900
Complex1_49kDa domain-containing protein.
   
    0.654
CTI12_AA242640
B, mitochondrion.
   
    0.654
CTI12_AA118790
NiFe hydrogenase-like protein.
   
    0.654
CTI12_AA116370
NiFe hydrogenase-like protein.
   
    0.654
CTI12_AA591300
NADH dehydrogenase.
   
    0.638
Your Current Organism:
Artemisia annua
NCBI taxonomy Id: 35608
Other names: A. annua, Artemisia annua L., sweet Annie, sweet wormwood
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.