STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTI12_AA369740Zinc finger, CCCH-type. (297 aa)    
Predicted Functional Partners:
CTI12_AA456190
Exosome complex component RRP43.
    
  0.713
CTI12_AA028510
Exosome complex component RRP43.
    
  0.713
CTI12_AA534230
D-aminoacyl-tRNA deacylase DtdA.
    
 0.627
CTI12_AA422690
D-aminoacyl-tRNA deacylase.
    
 0.627
CTI12_AA393740
D-aminoacyl-tRNA deacylase DtdA.
    
 0.627
CTI12_AA501980
Decapping 2.
   
 0.625
CTI12_AA333940
mRNA decapping protein 2, Box A.
   
 0.625
CTI12_AA359990
Ribosomal protein S5 domain 2-like superfamily protein.
    
  0.604
CTI12_AA312180
Nucleic acid-binding, OB-fold-like protein.
     
 0.587
CTI12_AA441090
3'-5'-exoribonuclease family protein.
    
  0.556
Your Current Organism:
Artemisia annua
NCBI taxonomy Id: 35608
Other names: A. annua, Artemisia annua L., sweet Annie, sweet wormwood
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