CTI12_AA292160 protein (Artemisia annua) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CTI12_AA292160

Uncharacterized protein. (354 aa)

Predicted Functional Partners:

CTI12_AA072120

0.537

CTI12_AA249910

0.532

CTI12_AA373400

0.531

CTI12_AA354390

0.530

CTI12_AA014500

0.530

CTI12_AA378550

0.529

CTI12_AA039070

0.528

CTI12_AA482920

0.523

CTI12_AA208920

0.523

CTI12_AA194480

0.522

Your Current Organism:

Artemisia annua

NCBI taxonomy Id: 35608
Other names: A. annua, Artemisia annua L., sweet Annie, sweet wormwood

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CTI12_AA014500	CTI12_AA039070	A0A2U1QLJ4	A0A2U1QDI8	Achaete-scute transcription factor-related protein.	Uncharacterized protein.	0.517
CTI12_AA014500	CTI12_AA072120	A0A2U1QLJ4	A0A2U1Q5N9	Achaete-scute transcription factor-related protein.	Uncharacterized protein.	0.517
CTI12_AA014500	CTI12_AA208920	A0A2U1QLJ4	A0A2U1P0T0	Achaete-scute transcription factor-related protein.	Uncharacterized protein.	0.513
CTI12_AA014500	CTI12_AA249910	A0A2U1QLJ4	A0A2U1NNC6	Achaete-scute transcription factor-related protein.	Pectinesterase inhibitor.	0.529
CTI12_AA014500	CTI12_AA292160	A0A2U1QLJ4	A0A2U1N990	Achaete-scute transcription factor-related protein.	Uncharacterized protein.	0.530
CTI12_AA014500	CTI12_AA354390	A0A2U1QLJ4	A0A2U1LDA3	Achaete-scute transcription factor-related protein.	Uncharacterized protein.	0.474
CTI12_AA014500	CTI12_AA373400	A0A2U1QLJ4	A0A2U1MJJ2	Achaete-scute transcription factor-related protein.	Pectinesterase inhibitor.	0.528
CTI12_AA014500	CTI12_AA378550	A0A2U1QLJ4	A0A2U1M2X9	Achaete-scute transcription factor-related protein.	Uncharacterized protein.	0.517
CTI12_AA014500	CTI12_AA482920	A0A2U1QLJ4	A0A2U1LJT4	Achaete-scute transcription factor-related protein.	Uncharacterized protein.	0.506
CTI12_AA039070	CTI12_AA014500	A0A2U1QDI8	A0A2U1QLJ4	Uncharacterized protein.	Achaete-scute transcription factor-related protein.	0.517
CTI12_AA039070	CTI12_AA072120	A0A2U1QDI8	A0A2U1Q5N9	Uncharacterized protein.	Uncharacterized protein.	0.532
CTI12_AA039070	CTI12_AA249910	A0A2U1QDI8	A0A2U1NNC6	Uncharacterized protein.	Pectinesterase inhibitor.	0.532
CTI12_AA039070	CTI12_AA292160	A0A2U1QDI8	A0A2U1N990	Uncharacterized protein.	Uncharacterized protein.	0.528
CTI12_AA039070	CTI12_AA354390	A0A2U1QDI8	A0A2U1LDA3	Uncharacterized protein.	Uncharacterized protein.	0.528
CTI12_AA039070	CTI12_AA373400	A0A2U1QDI8	A0A2U1MJJ2	Uncharacterized protein.	Pectinesterase inhibitor.	0.531
CTI12_AA039070	CTI12_AA482920	A0A2U1QDI8	A0A2U1LJT4	Uncharacterized protein.	Uncharacterized protein.	0.531
CTI12_AA072120	CTI12_AA014500	A0A2U1Q5N9	A0A2U1QLJ4	Uncharacterized protein.	Achaete-scute transcription factor-related protein.	0.517
CTI12_AA072120	CTI12_AA039070	A0A2U1Q5N9	A0A2U1QDI8	Uncharacterized protein.	Uncharacterized protein.	0.532
CTI12_AA072120	CTI12_AA194480	A0A2U1Q5N9	A0A2U1MJ20	Uncharacterized protein.	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.	0.527
CTI12_AA072120	CTI12_AA208920	A0A2U1Q5N9	A0A2U1P0T0	Uncharacterized protein.	Uncharacterized protein.	0.531