STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTI12_AA224250Pectin lyase-like superfamily protein; Belongs to the glycosyl hydrolase 28 family. (449 aa)    
Predicted Functional Partners:
CTI12_AA460130
Pectin lyase-like superfamily protein.
  
  
 
0.874
CTI12_AA045310
Pectin lyase-like superfamily protein; Belongs to the glycosyl hydrolase 28 family.
  
  
 
0.874
CTI12_AA608330
Polygalacturonase.
  
  
 
0.873
CTI12_AA198690
NADPH-dependent codeinone reductase 1-4.
     
 0.868
CTI12_AA463760
Pectin lyase-like superfamily protein.
  
  
 
0.857
CTI12_AA580220
Pectin lyase-like superfamily protein.
  
  
 
0.845
CTI12_AA550280
Putative polygalacturonase.
  
  
 
0.845
CTI12_AA211620
Putative polygalacturonase.
  
  
 
0.845
CTI12_AA044020
Pectin lyase-like superfamily protein.
  
  
 
0.845
CTI12_AA407200
Polygalacturonase.
  
  
 
0.843
Your Current Organism:
Artemisia annua
NCBI taxonomy Id: 35608
Other names: A. annua, Artemisia annua L., sweet Annie, sweet wormwood
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.