STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTI12_AA224510Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. (345 aa)    
Predicted Functional Partners:
CTI12_AA419400
Geranylgeranyl reductase; Belongs to the FPP/GGPP synthase family.
  
 
 
0.989
CTI12_AA298500
GHMP kinase family protein.
  
 0.960
CTI12_AA012000
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family.
  
 0.960
CTI12_AA603440
Phytoene synthase.
  
 0.959
CTI12_AA250650
Phytoene synthase.
  
 0.959
CTI12_AA054650
Phytoene synthase.
  
 0.959
CTI12_AA613010
Squalene/phytoene synthase.
  
 0.949
CTI12_AA414190
Squalene/phytoene synthase.
  
 0.949
CTI12_AA086500
Squalene/phytoene synthase.
  
 0.949
CTI12_AA543340
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
   
 0.934
Your Current Organism:
Artemisia annua
NCBI taxonomy Id: 35608
Other names: A. annua, Artemisia annua L., sweet Annie, sweet wormwood
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.