STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTI12_AA218870DUF632 domain-containing protein. (447 aa)    
Predicted Functional Partners:
CTI12_AA047670
40S ribosomal protein S10.
   
   0.683
CTI12_AA343100
Nucleic acid-binding, OB-fold; Belongs to the universal ribosomal protein uS12 family.
   
   0.680
CTI12_AA178160
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
  0.613
CTI12_AA438540
WD40 repeat-containing protein.
    
  0.606
CTI12_AA107900
RNA-recognition motif (RRM) Nup35-type domain-containing protein.
    
  0.575
CTI12_AA108130
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.575
CTI12_AA053430
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.575
CTI12_AA562320
Cell wall protein DAN4.
     
 0.573
CTI12_AA240910
Nucleoporin.
    
  0.569
CTI12_AA577790
Tubulin-folding cofactor D.
  
 
   0.564
Your Current Organism:
Artemisia annua
NCBI taxonomy Id: 35608
Other names: A. annua, Artemisia annua L., sweet Annie, sweet wormwood
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.