STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTI12_AA185810Histone-lysine N-methyltransferase ATXR5. (106 aa)    
Predicted Functional Partners:
CTI12_AA568540
AWS-like protein.
   
 
 0.841
CTI12_AA176240
AWS-like protein.
   
 
 0.820
CTI12_AA109270
AWS-like protein.
   
 
 0.820
CTI12_AA038620
JmjC domain-containing protein.
   
 0.798
CTI12_AA402070
WD40 repeat-containing protein.
    
 0.749
CTI12_AA100670
Zinc finger, BED-type, Zinc finger, C2H2, WD40/YVTN repeat-like-containing domain protein.
    
 0.749
CTI12_AA398470
Uncharacterized protein.
    
 
 0.732
CTI12_AA594330
MRG family protein.
   
 
 0.724
CTI12_AA566560
Chromo/chromo shadow domain, MRG domain protein.
   
 
 0.724
CTI12_AA340380
Chromo domain-like protein.
   
 
 0.724
Your Current Organism:
Artemisia annua
NCBI taxonomy Id: 35608
Other names: A. annua, Artemisia annua L., sweet Annie, sweet wormwood
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.