STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTI12_AA134310Uncharacterized protein. (169 aa)    
Predicted Functional Partners:
CTI12_AA137910
Winged helix-turn-helix DNA-binding domain, RNA polymerase Rpc34-like protein.
  
   
 0.531
CTI12_AA455210
Winged helix-turn-helix DNA-binding domain, RNA polymerase Rpc34-like protein.
  
   
 0.520
CTI12_AA299410
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.504
CTI12_AA178030
Uncharacterized protein.
  
     0.438
CTI12_AA192620
P-loop containing nucleoside triphosphate hydrolase.
  
     0.429
CTI12_AA173450
P-loop containing nucleoside triphosphate hydrolase.
  
     0.429
CTI12_AA576780
Myc-type, basic helix-loop-helix (BHLH) domain-containing protein.
  
     0.426
CTI12_AA008210
Myc-type, basic helix-loop-helix (BHLH) domain-containing protein.
  
     0.421
CTI12_AA231990
Myc-type, basic helix-loop-helix (BHLH) domain-containing protein.
  
     0.419
Your Current Organism:
Artemisia annua
NCBI taxonomy Id: 35608
Other names: A. annua, Artemisia annua L., sweet Annie, sweet wormwood
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