STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTI12_AA123530RRM domain-containing protein; Belongs to the Casparian strip membrane proteins (CASP) family. (617 aa)    
Predicted Functional Partners:
CTI12_AA445370
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.526
CTI12_AA259300
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.526
CTI12_AA365820
Auxin response factor, DNA-binding pseudobarrel domain protein.
  
     0.523
CTI12_AA625380
NAC domain-containing protein.
  
     0.519
CTI12_AA471440
NAC domain-containing protein.
  
     0.519
CTI12_AA108260
NAC domain-containing protein.
  
     0.518
CTI12_AA161580
NAC domain-containing protein.
  
     0.517
CTI12_AA281880
NAC domain-containing protein.
  
     0.516
CTI12_AA275750
OBERON-like protein; Probable transcription factor.
  
     0.515
CTI12_AA249680
Auxin response factor 6.
  
     0.515
Your Current Organism:
Artemisia annua
NCBI taxonomy Id: 35608
Other names: A. annua, Artemisia annua L., sweet Annie, sweet wormwood
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.