STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTI12_AA121550Alpha-amylase/subtilisin inhibitor. (206 aa)    
Predicted Functional Partners:
CTI12_AA507340
Peroxin 6.
     
 0.544
CTI12_AA557820
Ubiquitin-40S ribosomal protein S27a-2.
    
  0.535
CTI12_AA104100
Ubiquitin-40S ribosomal S27a-like protein.
    
  0.535
CTI12_AA256600
Ubiquitin-60S ribosomal protein L40.
    
  0.535
CTI12_AA067760
Ubiquitin-40S ribosomal protein S27a-3.
    
  0.535
CTI12_AA177320
Peroxin 5.
    
  0.530
CTI12_AA301320
Peroxisome 1.
     
 0.511
CTI12_AA528000
Ras-related small GTP-binding family protein.
   
 0.508
CTI12_AA524050
Myb-like domain-containing protein.
   
 0.508
CTI12_AA347450
Homeodomain-like, Myb-like domain protein.
   
 0.508
Your Current Organism:
Artemisia annua
NCBI taxonomy Id: 35608
Other names: A. annua, Artemisia annua L., sweet Annie, sweet wormwood
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.