STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTI12_AA113570Splicing factor SF3a60. (513 aa)    
Predicted Functional Partners:
CTI12_AA235130
Pre-mRNA splicing factor PRP21-like protein.
   
 0.992
CTI12_AA030900
Hydroxyproline-rich glycoprotein family protein.
    
 0.991
CTI12_AA088140
U2 small nuclear ribonucleoprotein A.
   
 0.980
CTI12_AA066440
Ribose-5-phosphate isomerase 3 chloroplastic.
   
 0.978
CTI12_AA412240
Uncharacterized protein.
   
 0.976
CTI12_AA193710
CID domain-containing protein.
   
 0.976
CTI12_AA012510
Nucleotide-binding, alpha-beta plait.
   
 0.965
CTI12_AA231600
Putative small nuclear ribonucleoprotein F.
   
 0.964
CTI12_AA197820
Splicing factor subunit; Belongs to the SF3B5 family.
   
 0.957
CTI12_AA061240
Splicing factor subunit; Belongs to the SF3B5 family.
   
 0.957
Your Current Organism:
Artemisia annua
NCBI taxonomy Id: 35608
Other names: A. annua, Artemisia annua L., sweet Annie, sweet wormwood
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.