STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTI12_AA106830Retrovirus-related Pol polyprotein from transposon TNT 1-94. (400 aa)    
Predicted Functional Partners:
CTI12_AA098680
Integrase catalytic domain-containing protein.
  
     0.516
CTI12_AA371330
Uncharacterized protein.
  
     0.513
CTI12_AA409690
Copia-type polyprotein.
  
     0.509
CTI12_AA369790
Homogeneously-staining region.
  
 
   0.508
CTI12_AA004360
Gag-pol polyprotein.
  
     0.508
CTI12_AA497410
Zinc finger, CCHC-type.
  
     0.507
CTI12_AA098640
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.507
CTI12_AA010300
Uncharacterized protein.
  
     0.506
CTI12_AA441580
Copia-like retrotransposon.
  
     0.505
CTI12_AA418660
Gag-Pol polyprotein.
  
     0.505
Your Current Organism:
Artemisia annua
NCBI taxonomy Id: 35608
Other names: A. annua, Artemisia annua L., sweet Annie, sweet wormwood
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.