STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTI12_AA090000Ubiquitin. (407 aa)    
Predicted Functional Partners:
CTI12_AA178160
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
  0.946
CTI12_AA444900
Ubiquitin-protein ligase 4.
   
 0.942
CTI12_AA440120
Ubiquitin-transferase.
   
 0.935
CTI12_AA395190
Armadillo.
   
 0.935
CTI12_AA129560
E3 ubiquitin-protein ligase UPL3.
   
 0.935
CTI12_AA548340
Phox/Bem1p.
   
 0.934
CTI12_AA451920
Phox/Bem1p.
   
 0.934
CTI12_AA367410
Phox/Bem1p.
   
 0.934
CTI12_AA338760
Phox/Bem1p.
   
 0.934
CTI12_AA148640
ZZ-type domain-containing protein.
   
 0.934
Your Current Organism:
Artemisia annua
NCBI taxonomy Id: 35608
Other names: A. annua, Artemisia annua L., sweet Annie, sweet wormwood
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.