STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTI12_AA087790RNA helicase. (731 aa)    
Predicted Functional Partners:
CTI12_AA607680
Small-subunit processome, Utp14.
   
 0.994
CTI12_AA595010
Small-subunit processome, Utp14.
   
 0.994
CTI12_AA085290
Sas10 C-terminal domain-containing protein.
   
 0.994
CTI12_AA084620
U3 ribonucleoprotein (Utp) family protein.
   
 0.994
CTI12_AA613980
NUC153-like protein.
   
 
 0.992
CTI12_AA303820
NUC153 domain-containing protein.
   
 
 0.992
CTI12_AA203240
NUC153-like protein.
   
 
 0.992
CTI12_AA074540
Apoptosis-antagonizing transcription factor.
   
 
 0.990
CTI12_AA441210
Ribosomal RNA processing protein 36.
   
 0.987
CTI12_AA407170
MIF4G domain-containing protein / MA3 domain-containing protein.
   
 
 0.986
Your Current Organism:
Artemisia annua
NCBI taxonomy Id: 35608
Other names: A. annua, Artemisia annua L., sweet Annie, sweet wormwood
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.