STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTI12_AA063650NADP-dependent malic enzyme. (272 aa)    
Predicted Functional Partners:
CTI12_AA381500
Malate dehydrogenase.
  
 0.914
CTI12_AA061010
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.903
CTI12_AA309610
Endoglucanase.
  
 
 0.883
CTI12_AA110930
Fumarase 1.
  
 
 0.883
CTI12_AA202910
Formyltetrahydrofolate deformylase.
     
 0.859
CTI12_AA595740
Malate dehydrogenase, cytoplasmic.
  
 0.857
CTI12_AA218110
Malate dehydrogenase.
  
 0.857
CTI12_AA299580
3-isopropylmalate dehydratase, small subunit.
    
 0.850
CTI12_AA502130
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.846
CTI12_AA365730
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.846
Your Current Organism:
Artemisia annua
NCBI taxonomy Id: 35608
Other names: A. annua, Artemisia annua L., sweet Annie, sweet wormwood
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