STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTI12_AA037790SPOC domain / Transcription elongation factor S-II protein. (642 aa)    
Predicted Functional Partners:
CTI12_AA212200
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.947
CTI12_AA328600
Putative 15.9 kDa subunit of RNA polymerase II.
    
  0.933
CTI12_AA607090
DNA-directed RNA polymerase family protein.
    
  0.907
CTI12_AA536670
DNA-directed RNA polymerase family protein.
    
  0.907
CTI12_AA173240
DNA-directed RNA polymerase, RBP11-like protein.
    
 0.876
CTI12_AA071120
DNA-directed RNA polymerase, RBP11-like protein.
    
 0.876
CTI12_AA335030
RNA polymerases N / 8 kDa subunit.
    
  0.875
CTI12_AA325100
RNA polymerases N / 8 kDa subunit.
    
  0.875
CTI12_AA596720
Armadillo-like helical.
   
  
 0.837
CTI12_AA445100
RNA polymerase Rpb6.
    
  0.837
Your Current Organism:
Artemisia annua
NCBI taxonomy Id: 35608
Other names: A. annua, Artemisia annua L., sweet Annie, sweet wormwood
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