STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTI12_AA001420Ribosome maturation factor RimP. (306 aa)    
Predicted Functional Partners:
CTI12_AA298290
Protein kinase superfamily protein.
      
 0.564
CTI12_AA288820
Uncharacterized protein.
  
 
  0.512
CTI12_AA401680
GPCR kinase.
      
 0.477
CTI12_AA121370
Uncharacterized protein.
  
 
  0.437
CTI12_AA575560
Uncharacterized protein.
  
     0.434
CTI12_AA231300
Vascular plant one zinc finger protein.
  
     0.433
CTI12_AA617140
Vascular plant one zinc finger protein.
  
     0.431
CTI12_AA001310
SBP-like protein.
  
     0.430
CTI12_AA483170
Cytochrome P450.
  
 
   0.429
CTI12_AA322500
Zinc finger, PHD-type.
  
 
   0.429
Your Current Organism:
Artemisia annua
NCBI taxonomy Id: 35608
Other names: A. annua, Artemisia annua L., sweet Annie, sweet wormwood
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.