STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_214560Uncharacterized protein. (297 aa)    
Predicted Functional Partners:
SOVF_153150
Uncharacterized protein.
   
 
 0.999
SOVF_055180
Diphthami_syn_2 domain-containing protein.
   
 0.962
SOVF_147080
Ribosomal_L18_c domain-containing protein.
  
 0.958
SOVF_010860
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
 0.950
SOVF_169600
Tr-type G domain-containing protein.
 
     0.949
SOVF_013530
Uncharacterized protein.
   
 0.938
SOVF_121380
Ribosomal_L2_C domain-containing protein.
  
 0.926
SOVF_130090
Ribosomal_L2_C domain-containing protein.
  
 0.926
SOVF_213760
Uncharacterized protein.
   
 0.922
SOVF_115380
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.922
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.