SOVF_208560 protein (Spinacia oleracea) - STRING interaction network

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Score

SOVF_208560

RRM domain-containing protein. (152 aa)

Predicted Functional Partners:

SOVF_166050

0.796

SOVF_126270

0.766

SOVF_036620

0.766

SOVF_060000

0.740

SOVF_073520

0.739

SOVF_004180

0.736

SOVF_153760

0.731

SOVF_075970

0.720

SOVF_008620

0.707

SOVF_056220

0.690

Your Current Organism:

Spinacia oleracea

NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SOVF_004180	SOVF_008620	A0A0K9R4D7	A0A0K9S0E7	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.999
SOVF_004180	SOVF_056220	A0A0K9R4D7	A0A0K9RKJ5	Sm domain-containing protein.	PWI domain-containing protein.	0.719
SOVF_004180	SOVF_060000	A0A0K9R4D7	A0A0K9RJF3	Sm domain-containing protein.	Nuclear cap-binding protein subunit 2.	0.975
SOVF_004180	SOVF_073520	A0A0K9R4D7	A0A0K9RF91	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.999
SOVF_004180	SOVF_075970	A0A0K9R4D7	A0A0K9REH8	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D2.	0.999
SOVF_004180	SOVF_153760	A0A0K9R4D7	A0A0K9QQ75	Sm domain-containing protein.	MIF4G domain-containing protein.	0.976
SOVF_004180	SOVF_208560	A0A0K9R4D7	A0A0K9Q8C9	Sm domain-containing protein.	RRM domain-containing protein.	0.736
SOVF_008620	SOVF_004180	A0A0K9S0E7	A0A0K9R4D7	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Sm domain-containing protein.	0.999
SOVF_008620	SOVF_056220	A0A0K9S0E7	A0A0K9RKJ5	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	PWI domain-containing protein.	0.708
SOVF_008620	SOVF_060000	A0A0K9S0E7	A0A0K9RJF3	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Nuclear cap-binding protein subunit 2.	0.984
SOVF_008620	SOVF_073520	A0A0K9S0E7	A0A0K9RF91	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.999
SOVF_008620	SOVF_075970	A0A0K9S0E7	A0A0K9REH8	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D2.	0.999
SOVF_008620	SOVF_153760	A0A0K9S0E7	A0A0K9QQ75	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	MIF4G domain-containing protein.	0.977
SOVF_008620	SOVF_208560	A0A0K9S0E7	A0A0K9Q8C9	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	RRM domain-containing protein.	0.707
SOVF_036620	SOVF_056220	A0A0K9RRI1	A0A0K9RKJ5	RRM domain-containing protein.	PWI domain-containing protein.	0.840
SOVF_036620	SOVF_060000	A0A0K9RRI1	A0A0K9RJF3	RRM domain-containing protein.	Nuclear cap-binding protein subunit 2.	0.752
SOVF_036620	SOVF_153760	A0A0K9RRI1	A0A0K9QQ75	RRM domain-containing protein.	MIF4G domain-containing protein.	0.772
SOVF_036620	SOVF_208560	A0A0K9RRI1	A0A0K9Q8C9	RRM domain-containing protein.	RRM domain-containing protein.	0.766
SOVF_056220	SOVF_004180	A0A0K9RKJ5	A0A0K9R4D7	PWI domain-containing protein.	Sm domain-containing protein.	0.719
SOVF_056220	SOVF_008620	A0A0K9RKJ5	A0A0K9S0E7	PWI domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.708