STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_207910CoA carboxyltransferase N-terminal domain-containing protein. (337 aa)    
Predicted Functional Partners:
SOVF_183780
Uncharacterized protein.
 
 0.995
SOVF_125790
Uncharacterized protein.
 
 0.989
SOVF_061890
CoA carboxyltransferase C-terminal domain-containing protein.
 
  
  0.976
SOVF_043480
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.953
SOVF_027360
Uncharacterized protein.
  
 
 0.945
SOVF_146500
Uncharacterized protein.
  
 
 0.903
SOVF_065980
Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 0.872
SOVF_210210
Biotin_carb_N domain-containing protein.
  
 0.871
SOVF_153380
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.791
SOVF_064670
Pyruvate carboxyltransferase domain-containing protein.
 0.714
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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