STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_207140Photolyase/cryptochrome alpha/beta domain-containing protein. (543 aa)    
Predicted Functional Partners:
SOVF_075510
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
   
 
 0.792
SOVF_105990
TIMELESS domain-containing protein.
    
 0.690
SOVF_106000
TIMELESS_C domain-containing protein.
    
 0.690
SOVF_033490
Uncharacterized protein.
      
 0.594
SOVF_105030
CPD photolyase.
      
 0.574
SOVF_080020
Uncharacterized protein.
    
 
 0.573
SOVF_037110
Uncharacterized protein.
  
  
 0.504
SOVF_041970
Floricaula/leafy-like transcription factor; Probable transcription factor. Belongs to the FLO/LFY family.
      
 0.489
SOVF_177440
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 
 0.487
SOVF_147240
Uncharacterized protein.
   
 
 0.457
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.