Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cox2 | SOVF_000090 | A0A0K9R567 | A0A0K9S2P1 | COX2_CUA domain-containing protein. | Uncharacterized protein. | 0.998 |
Cox2 | SOVF_050570 | A0A0K9R567 | A0A0K9RMC5 | COX2_CUA domain-containing protein. | Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport. | 0.999 |
Cox2 | SOVF_066870 | A0A0K9R567 | A0A0K9RH32 | COX2_CUA domain-containing protein. | Uncharacterized protein. | 0.990 |
Cox2 | SOVF_079100 | A0A0K9R567 | A0A0K9REZ6 | COX2_CUA domain-containing protein. | Uncharacterized protein. | 0.995 |
Cox2 | SOVF_124870 | A0A0K9R567 | A0A0K9QZ23 | COX2_CUA domain-containing protein. | Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.977 |
Cox2 | SOVF_178790 | A0A0K9R567 | A0A0K9QHF2 | COX2_CUA domain-containing protein. | Cytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. | 0.985 |
Cox2 | SOVF_202070 | A0A0K9R567 | A0A0K9QA72 | COX2_CUA domain-containing protein. | Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.985 |
Cox2 | SOVF_206090 | A0A0K9R567 | A0A0K9Q932 | COX2_CUA domain-containing protein. | Uncharacterized protein. | 0.978 |
Cox2 | SOVF_208820 | A0A0K9R567 | A0A0K9Q9V8 | COX2_CUA domain-containing protein. | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.999 |
SOVF_000090 | Cox2 | A0A0K9S2P1 | A0A0K9R567 | Uncharacterized protein. | COX2_CUA domain-containing protein. | 0.998 |
SOVF_000090 | SOVF_050570 | A0A0K9S2P1 | A0A0K9RMC5 | Uncharacterized protein. | Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport. | 0.958 |
SOVF_000090 | SOVF_066870 | A0A0K9S2P1 | A0A0K9RH32 | Uncharacterized protein. | Uncharacterized protein. | 0.986 |
SOVF_000090 | SOVF_079100 | A0A0K9S2P1 | A0A0K9REZ6 | Uncharacterized protein. | Uncharacterized protein. | 0.996 |
SOVF_000090 | SOVF_124870 | A0A0K9S2P1 | A0A0K9QZ23 | Uncharacterized protein. | Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.872 |
SOVF_000090 | SOVF_178790 | A0A0K9S2P1 | A0A0K9QHF2 | Uncharacterized protein. | Cytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. | 0.541 |
SOVF_000090 | SOVF_183360 | A0A0K9S2P1 | A0A0K9QHN0 | Uncharacterized protein. | Uncharacterized protein. | 0.602 |
SOVF_000090 | SOVF_202070 | A0A0K9S2P1 | A0A0K9QA72 | Uncharacterized protein. | Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.643 |
SOVF_000090 | SOVF_206090 | A0A0K9S2P1 | A0A0K9Q932 | Uncharacterized protein. | Uncharacterized protein. | 0.797 |
SOVF_000090 | SOVF_208820 | A0A0K9S2P1 | A0A0K9Q9V8 | Uncharacterized protein. | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.951 |
SOVF_050570 | Cox2 | A0A0K9RMC5 | A0A0K9R567 | Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport. | COX2_CUA domain-containing protein. | 0.999 |
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