STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_203770Uncharacterized protein. (462 aa)    
Predicted Functional Partners:
SOVF_131010
Uncharacterized protein.
   
 0.999
SOVF_016340
Uncharacterized protein.
   
 0.999
SOVF_152760
Protein kinase domain-containing protein.
   
 
 0.997
SOVF_091760
HORMA domain-containing protein.
   
 0.990
SOVF_206870
BUB1 N-terminal domain-containing protein.
   
 0.928
SOVF_143120
Uncharacterized protein.
   
 0.928
SOVF_047150
BUB1 N-terminal domain-containing protein.
   
 0.928
SOVF_193430
BZIP domain-containing protein.
   
 0.915
SOVF_093050
BZIP domain-containing protein.
   
 0.915
SOVF_161560
Cnd3 domain-containing protein.
   
  
 0.901
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.