STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_198130Uncharacterized protein. (285 aa)    
Predicted Functional Partners:
SOVF_094080
TPR_REGION domain-containing protein.
   
 
 0.658
SOVF_068680
Uncharacterized protein.
    
 
 0.614
SOVF_142800
NAD(P)-bd_dom domain-containing protein.
   
  
 0.608
SOVF_146780
Uncharacterized protein.
      
 0.606
SOVF_129620
Rieske domain-containing protein.
      
 0.603
SOVF_029590
AIG1-type G domain-containing protein.
    
 
 0.598
SOVF_146400
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
   
   0.584
SOVF_180500
Uncharacterized protein.
      
 0.574
SOVF_103950
Uncharacterized protein.
      
 0.565
SOVF_149730
Uncharacterized protein.
      
 0.563
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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