STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_202680Uncharacterized protein. (934 aa)    
Predicted Functional Partners:
SOVF_029210
Uncharacterized protein.
 
  
   0.899
SOVF_088980
DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Unwinds duplex DNA. Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination; Belongs to the RecA family. RAD51 subfamily.
  
 
 0.735
SOVF_077630
Uncharacterized protein.
  
0.674
SOVF_211070
ARID domain-containing protein.
   
 0.671
SOVF_061930
Uncharacterized protein.
   
 0.671
SOVF_042330
Uncharacterized protein.
   
 0.671
SOVF_002550
RuvB-like helicase; Belongs to the RuvB family.
    
 0.643
SOVF_030970
DNA ligase.
   
 0.638
SOVF_063370
RECA_2 domain-containing protein.
  
 
 0.637
SOVF_009890
Uncharacterized protein; Belongs to the actin family.
    
 0.635
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.