STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_195180Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (350 aa)    
Predicted Functional Partners:
SOVF_010860
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
   0.844
SOVF_193420
Ribosomal_L18_c domain-containing protein.
  
 
 0.833
SOVF_147080
Ribosomal_L18_c domain-containing protein.
  
 
 0.833
SOVF_124750
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 0.810
SOVF_171940
Uncharacterized protein.
  
 
 0.786
SOVF_032440
Uncharacterized protein.
  
 
 0.786
SOVF_004660
Uncharacterized protein.
  
 
 0.786
SOVF_068230
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
    
 
 0.772
SOVF_087860
KOW domain-containing protein.
  
   0.749
SOVF_059130
KOW domain-containing protein.
  
   0.749
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.