STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_193040Uncharacterized protein. (147 aa)    
Predicted Functional Partners:
SOVF_180810
Uncharacterized protein.
   
  
 0.658
SOVF_047770
Uncharacterized protein.
   
  
 0.643
SOVF_142360
Uncharacterized protein.
   
  
 0.595
SOVF_012860
Uncharacterized protein.
  
  
 0.531
SOVF_047110
Uncharacterized protein.
   
  
 0.528
SOVF_100570
Uncharacterized protein.
   
  
 0.515
SOVF_081710
Uncharacterized protein.
   
  
 0.493
SOVF_142030
Uncharacterized protein.
   
  
 0.492
SOVF_158130
Uncharacterized protein.
   
  
 0.490
SOVF_167820
Uncharacterized protein.
   
  
 0.484
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.