STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_192520Uncharacterized protein. (1044 aa)    
Predicted Functional Partners:
SOVF_187570
Ubiquitin-like domain-containing protein.
    
 0.758
SOVF_109900
Rhodanese domain-containing protein.
    
 0.697
SOVF_102190
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 0.697
SOVF_117410
Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
    
 0.660
SOVF_040450
Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
    
 0.660
SOVF_108470
WD_REPEATS_REGION domain-containing protein.
   
 0.610
SOVF_138210
WD_REPEATS_REGION domain-containing protein.
   
 0.608
SOVF_019490
Cir_N domain-containing protein.
    
 0.608
SOVF_200610
Sas10 domain-containing protein.
   
 0.606
SOVF_195670
Uncharacterized protein.
    
 0.605
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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