STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_198850Importin subunit alpha; Belongs to the importin alpha family. (529 aa)    
Predicted Functional Partners:
SOVF_006460
Importin N-terminal domain-containing protein.
   
 0.863
SOVF_188920
Importin N-terminal domain-containing protein.
   
 0.847
SOVF_137850
Importin N-terminal domain-containing protein.
   
 
 0.831
SOVF_153760
MIF4G domain-containing protein.
   
 
 0.790
SOVF_060000
Nuclear cap-binding protein subunit 2.
    
 
 0.756
SOVF_092780
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
    
   0.739
SOVF_093630
RanBD1 domain-containing protein.
   
 
 0.671
SOVF_216600
RanBD1 domain-containing protein.
   
 
 0.638
SOVF_106910
RanBD1 domain-containing protein.
   
 
 0.638
SOVF_093240
RanBD1 domain-containing protein.
   
 
 0.638
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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