STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_197580Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (1062 aa)    
Predicted Functional Partners:
SOVF_153150
Uncharacterized protein.
   
 
 0.936
SOVF_044290
AA_TRNA_LIGASE_II domain-containing protein.
  
  
 0.901
SOVF_000280
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 
0.900
SOVF_098200
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
0.858
SOVF_087650
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
0.852
SOVF_008400
DALR_1 domain-containing protein.
  
  
 0.847
SOVF_094360
Uncharacterized protein.
  
  
 0.826
SOVF_056950
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
0.804
SOVF_209870
tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.801
SOVF_182530
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.801
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.