STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_189870TPR_REGION domain-containing protein. (557 aa)    
Predicted Functional Partners:
SOVF_023270
Uncharacterized protein.
  
   0.646
SOVF_124840
Uncharacterized protein.
    
 0.594
SOVF_077770
TPR_REGION domain-containing protein.
    
 0.593
SOVF_122280
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.588
SOVF_117580
ANAPC4 domain-containing protein.
    
 0.587
SOVF_142490
Uncharacterized protein.
    
 0.586
SOVF_085030
APC1_C domain-containing protein.
    
 0.585
SOVF_142980
Uncharacterized protein.
    
 0.570
SOVF_121710
ANAPC5 domain-containing protein.
   
 0.557
SOVF_077630
Uncharacterized protein.
    
 0.553
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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