STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_195450UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)    
Predicted Functional Partners:
SOVF_017380
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
  
  
 
0.900
SOVF_023000
HECT domain-containing protein.
   
 0.896
SOVF_097120
HECT domain-containing protein.
   
 0.891
SOVF_031290
Uncharacterized protein.
    
 0.839
SOVF_021560
Ubiquitin thioesterase.
    
 0.767
SOVF_191270
Uncharacterized protein.
    
 0.765
SOVF_085650
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.721
SOVF_176130
UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.
   
 0.703
SOVF_013320
UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.
   
 0.703
SOVF_097830
Pex2_Pex12 domain-containing protein.
    
 0.697
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.