STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_185050ERCC4 domain-containing protein. (469 aa)    
Predicted Functional Partners:
SOVF_129660
Uncharacterized protein.
   
 0.959
SOVF_055930
Uncharacterized protein.
   
 0.941
SOVF_113350
DUF1767 domain-containing protein.
    
 0.938
SOVF_072760
3'-5' exonuclease domain-containing protein.
   
 0.905
SOVF_000900
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 0.905
SOVF_092720
Uncharacterized protein.
   
 0.902
SOVF_000050
Uncharacterized protein.
    
 0.870
SOVF_049100
MPN domain-containing protein.
   
 0.837
SOVF_189470
Uncharacterized protein.
   
 
 0.832
SOVF_177100
RECA_2 domain-containing protein.
   
 0.830
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.