STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_179380Protein-S-isoprenylcysteine O-methyltransferase. (197 aa)    
Predicted Functional Partners:
SOVF_035730
Uncharacterized protein.
   
 0.946
SOVF_057760
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
    
 0.942
SOVF_173930
Abhydrolase_3 domain-containing protein.
     
 0.913
SOVF_025240
Abhydrolase_3 domain-containing protein.
     
 0.913
SOVF_020120
Protein-S-isoprenylcysteine O-methyltransferase.
  
  
 
0.901
SOVF_183100
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
      
 0.436
SOVF_088550
Uncharacterized protein.
      
 0.436
SOVF_079140
C-CAP/cofactor C-like domain-containing protein.
      
 0.426
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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