STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_181950Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (320 aa)    
Predicted Functional Partners:
SOVF_177430
Aminotran_1_2 domain-containing protein.
     
 0.959
SOVF_212580
Aminotran_1_2 domain-containing protein.
     
 0.956
SOVF_006280
Aminotran_1_2 domain-containing protein.
     
 0.902
SOVF_201530
Uncharacterized protein.
  
  
 0.638
SOVF_066360
Uncharacterized protein.
  
  
 0.638
SOVF_071300
Adenosylhomocysteinase.
      
 0.557
SOVF_058430
DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
      
 0.557
SOVF_062280
DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
      
 0.557
SOVF_008950
Adenosylhomocysteinase.
      
 0.557
SOVF_197980
Oxidored_FMN domain-containing protein.
      
 0.553
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.