STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_169140Uncharacterized protein. (625 aa)    
Predicted Functional Partners:
SOVF_111470
Uncharacterized protein.
  
     0.518
SOVF_036680
Uncharacterized protein.
  
     0.494
SOVF_130660
Uncharacterized protein.
  
     0.478
SOVF_178930
Uncharacterized protein.
  
     0.477
SOVF_081050
Uncharacterized protein.
  
     0.471
SOVF_025090
Uncharacterized protein.
  
     0.470
SOVF_088360
Uncharacterized protein.
  
     0.443
SOVF_133000
Uncharacterized protein.
  
     0.438
SOVF_050800
Uncharacterized protein.
  
     0.435
SOVF_178920
Uncharacterized protein.
  
     0.434
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.