STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_16711050S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (123 aa)    
Predicted Functional Partners:
SOVF_010860
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.976
RPL31
50S ribosomal protein L31, chloroplastic; Component of the chloroplast ribosome (chloro-ribosome), a dedicated translation machinery responsible for the synthesis of chloroplast genome-encoded proteins, including proteins of the transcription and translation machinery and components of the photosynthetic apparatus; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.
  
 
 0.976
SOVF_115990
Uncharacterized protein.
  
 
 0.973
SOVF_165680
Uncharacterized protein.
  
 
 0.959
SOVF_141050
Uncharacterized protein.
  
 
 0.948
SOVF_184800
Ribosomal_TL5_C domain-containing protein.
  
 
 0.944
SOVF_185930
Uncharacterized protein.
  
 
 0.941
SOVF_042650
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.941
PRPS9
30S ribosomal protein S9, chloroplastic; Component of the chloroplast ribosome (chloro-ribosome), a dedicated translation machinery responsible for the synthesis of chloroplast genome-encoded proteins, including proteins of the transcription and translation machinery and components of the photosynthetic apparatus; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.941
RPL19
50S ribosomal protein L19, chloroplastic; Component of the chloroplast ribosome (chloro-ribosome), a dedicated translation machinery responsible for the synthesis of chloroplast genome-encoded proteins, including proteins of the transcription and translation machinery and components of the photosynthetic apparatus; Belongs to the bacterial ribosomal protein bL19 family.
  
 
 0.941
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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