STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_171320Uncharacterized protein. (300 aa)    
Predicted Functional Partners:
SOVF_137000
DAHP_synth_1 domain-containing protein.
 
  
 0.939
SOVF_035710
DAHP_synth_1 domain-containing protein.
 
  
 0.939
SOVF_163590
Acetyltransf_11 domain-containing protein.
 
   
 0.820
SOVF_213000
Glycos_transf_N domain-containing protein.
 
   
 0.815
SOVF_071620
Uncharacterized protein.
 
   
 0.809
SOVF_201630
Uncharacterized protein.
 
   
 0.774
SOVF_208610
LpxD domain-containing protein.
 
   
 0.770
SOVF_134670
Uncharacterized protein; Belongs to the SIS family. GutQ/KpsF subfamily.
  
   
 0.673
SOVF_012860
Uncharacterized protein.
     
 0.626
SOVF_037110
Uncharacterized protein.
      
 0.604
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.