STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_166130OTU domain-containing protein. (509 aa)    
Predicted Functional Partners:
SOVF_086620
OTU domain-containing protein.
      
0.575
SOVF_093520
OTU domain-containing protein.
      
 0.574
SOVF_192070
Nodulin-like domain-containing protein.
      
 0.572
SOVF_185090
SWIRM domain-containing protein.
    
 
 0.559
SOVF_103040
Ubiquitin-like domain-containing protein.
    
  0.497
SOVF_078370
Ribosomal_S27 domain-containing protein.
    
  0.497
SOVF_034880
Ubiquitin-like domain-containing protein.
    
  0.497
SOVF_156820
OTU domain-containing protein.
      
 0.473
SOVF_023760
MPN domain-containing protein.
 
    
 0.446
SOVF_068810
Uncharacterized protein; Belongs to the peptidase C19 family.
   
 
 0.437
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.