Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SOVF_014890 | SOVF_042080 | A0A0K9S031 | A0A0K9RPU4 | Uncharacterized protein. | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.996 |
SOVF_014890 | SOVF_042740 | A0A0K9S031 | A0A0K9RPN4 | Uncharacterized protein. | CYCLIN domain-containing protein; Belongs to the cyclin family. | 0.996 |
SOVF_014890 | SOVF_074410 | A0A0K9S031 | A0A0K9REY2 | Uncharacterized protein. | Uncharacterized protein. | 0.996 |
SOVF_014890 | SOVF_106600 | A0A0K9S031 | A0A0K9R4U9 | Uncharacterized protein. | Uncharacterized protein. | 0.886 |
SOVF_014890 | SOVF_137390 | A0A0K9S031 | A0A0K9QVB8 | Uncharacterized protein. | Uncharacterized protein. | 0.985 |
SOVF_014890 | SOVF_154630 | A0A0K9S031 | A0A0K9QPZ9 | Uncharacterized protein. | General transcription factor IIH subunit. | 0.996 |
SOVF_014890 | SOVF_165210 | A0A0K9S031 | A0A0K9QLM9 | Uncharacterized protein. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | 0.996 |
SOVF_014890 | SOVF_165390 | A0A0K9S031 | A0A0K9QLI0 | Uncharacterized protein. | Uncharacterized protein. | 0.969 |
SOVF_014890 | SOVF_188500 | A0A0K9S031 | A0A0K9QEE1 | Uncharacterized protein. | Uncharacterized protein. | 0.993 |
SOVF_014890 | SOVF_188740 | A0A0K9S031 | A0A0K9QEC5 | Uncharacterized protein. | MAT1 domain-containing protein. | 0.985 |
SOVF_042080 | SOVF_014890 | A0A0K9RPU4 | A0A0K9S031 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Uncharacterized protein. | 0.996 |
SOVF_042080 | SOVF_042740 | A0A0K9RPU4 | A0A0K9RPN4 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | CYCLIN domain-containing protein; Belongs to the cyclin family. | 0.993 |
SOVF_042080 | SOVF_074410 | A0A0K9RPU4 | A0A0K9REY2 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Uncharacterized protein. | 0.996 |
SOVF_042080 | SOVF_106600 | A0A0K9RPU4 | A0A0K9R4U9 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Uncharacterized protein. | 0.873 |
SOVF_042080 | SOVF_137390 | A0A0K9RPU4 | A0A0K9QVB8 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Uncharacterized protein. | 0.996 |
SOVF_042080 | SOVF_154630 | A0A0K9RPU4 | A0A0K9QPZ9 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | General transcription factor IIH subunit. | 0.996 |
SOVF_042080 | SOVF_165210 | A0A0K9RPU4 | A0A0K9QLM9 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | 0.992 |
SOVF_042080 | SOVF_165390 | A0A0K9RPU4 | A0A0K9QLI0 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Uncharacterized protein. | 0.973 |
SOVF_042080 | SOVF_188500 | A0A0K9RPU4 | A0A0K9QEE1 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Uncharacterized protein. | 0.996 |
SOVF_042080 | SOVF_188740 | A0A0K9RPU4 | A0A0K9QEC5 | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | MAT1 domain-containing protein. | 0.986 |
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