STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_164750Uncharacterized protein. (573 aa)    
Predicted Functional Partners:
SOVF_172100
Uncharacterized protein.
   
 0.964
SOVF_145500
Epimerase domain-containing protein.
  
 
 0.959
SOVF_116060
Phenylalanine ammonia-lyase.
  
 
 0.956
SOVF_212760
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 0.939
SOVF_085790
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 0.939
SOVF_071140
Uncharacterized protein; Belongs to the cytochrome P450 family.
    
 0.929
SOVF_041080
Uncharacterized protein.
   
 0.851
SOVF_137940
Hydrolase_4 domain-containing protein.
    
 0.847
SOVF_008070
Hydrolase_4 domain-containing protein.
    
 0.843
SOVF_211970
Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
  
 
 0.823
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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