STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_158010Uncharacterized protein. (512 aa)    
Predicted Functional Partners:
SOVF_181680
ANK_REP_REGION domain-containing protein.
  
   
 0.680
SOVF_046630
Uncharacterized protein.
  
   
 0.617
SOVF_154660
Uncharacterized protein.
  
   
 0.582
SOVF_063940
ANK_REP_REGION domain-containing protein.
  
 
 
 0.576
SOVF_030400
ANK_REP_REGION domain-containing protein.
  
 
  0.572
SOVF_009100
Uncharacterized protein.
  
 
  0.570
SOVF_154670
Uncharacterized protein.
  
   
 0.563
SOVF_109980
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.548
SOVF_208200
ANK_REP_REGION domain-containing protein.
  
     0.532
SOVF_035440
ANK_REP_REGION domain-containing protein.
  
     0.531
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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