STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_161210SUMO-activating enzyme subunit; Belongs to the ubiquitin-activating E1 family. (645 aa)    
Predicted Functional Partners:
SOVF_028830
ThiF domain-containing protein.
   
 0.985
SOVF_110690
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.914
SOVF_028370
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.914
SOVF_027010
SUMO-activating enzyme subunit; Belongs to the ubiquitin-activating E1 family.
  
  
 
0.900
SOVF_041850
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.814
SOVF_197390
Small ubiquitin-related modifier.
   
 0.728
SOVF_067150
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.
    
 0.722
SOVF_097120
HECT domain-containing protein.
   
 0.704
SOVF_023000
HECT domain-containing protein.
  
 0.704
SOVF_202250
Rad60-SLD domain-containing protein.
   
 0.700
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.