STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_159820Xpo1 domain-containing protein. (1198 aa)    
Predicted Functional Partners:
SOVF_098770
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.984
SOVF_064390
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.984
SOVF_175850
Uncharacterized protein.
    
 0.892
SOVF_118420
C2H2-type domain-containing protein.
    
 0.892
SOVF_118140
Uncharacterized protein.
    
 
 0.731
SOVF_088680
DNA ligase.
   
  
 0.708
SOVF_024140
DNA ligase.
   
  
 0.708
SOVF_015520
Uncharacterized protein.
   
 0.681
SOVF_052350
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
    
  0.664
SOVF_163250
Uncharacterized protein.
  
 
 
 0.614
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
Server load: low (26%) [HD]