STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOVF_153980Uncharacterized protein. (534 aa)    
Predicted Functional Partners:
SOVF_070110
Uncharacterized protein.
   
 0.821
SOVF_162770
Uncharacterized protein.
   
 
 0.661
SOVF_087510
Uncharacterized protein.
   
 
 0.661
SOVF_082320
Uncharacterized protein.
   
 
 0.661
SOVF_062980
FAD-binding FR-type domain-containing protein.
   
 
 0.661
SOVF_155440
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 0.595
SOVF_099200
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 
 0.572
SOVF_131020
SCP domain-containing protein; Belongs to the CRISP family.
      
 0.568
SOVF_008590
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
0.478
SOVF_134250
SCP domain-containing protein; Belongs to the CRISP family.
      
 0.477
Your Current Organism:
Spinacia oleracea
NCBI taxonomy Id: 3562
Other names: S. oleracea, Spinacea oleracea, Spinacia oleracea L., spinach
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